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tximport报错:Error in .local(objec

tximport报错:Error in .local(objec

作者: 嘿嘿嘿嘿哈 | 来源:发表于2024-08-02 23:09 被阅读0次

salmon数据用txiport导入R时,明明用的都是一样的转录本注释,但是提示None of the transcripts in the quantification files are present

txi <- tximport(files, type = "salmon", tx2gene = t2s)
#reading in files with read_tsv
#1 2 3 
#Error in .local(object, ...) : 
 # None of the transcripts in the quantification files are present
  #in the first column of tx2gene. Check to see that you are using
  #the same annotation for both

根据提示修改,添加参数后解决了问题:


image.png

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