python11

# -*- coding: utf-8 -*-
#!/usr/bin/env python

import os
import sys

inputtxt = sys.argv[1] # input motify table
output = sys.argv[2] # output shell script
delfile = sys.argv[3] # modify fpkm 


outputcon = open(output,"w")
with open(inputtxt,"r") as inputliness:
    inputlines = inputliness.readlines()
    for inputline in inputlines[1:]:
        inputlin = inputline.strip().split("\t")
        rawname = inputlin[0]
        newname = inputlin[1]
        outputcon.write("sed -i 's#"+rawname+"#"+newname+"#g' "+delfile+"\n")