美文网首页
linux028 Conda无法安装及更新

linux028 Conda无法安装及更新

作者: caoqiansheng | 来源:发表于2020-09-03 14:41 被阅读0次

    莫名的conda就嗝屁了,在安装软件的过程中,遇到以下error report
    conda install fastqc

    Collecting package metadata (current_repodata.json): failed
    
    # >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
    
        Traceback (most recent call last):
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/core/subdir_data.py", line 244, in _load
            raw_repodata_str = fetch_repodata_remote_request(
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/core/subdir_data.py", line 598, in fetch_repodata_remote_request
            raise Response304ContentUnchanged()
        conda.core.subdir_data.Response304ContentUnchanged
    
        During handling of the above exception, another exception occurred:
    
        Traceback (most recent call last):
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/exceptions.py", line 1079, in __call__
            return func(*args, **kwargs)
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/cli/main.py", line 84, in _main
            exit_code = do_call(args, p)
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/cli/conda_argparse.py", line 82, in do_call
            return getattr(module, func_name)(args, parser)
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/cli/main_install.py", line 20, in execute
            install(args, parser, 'install')
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/cli/install.py", line 261, in install
            unlink_link_transaction = solver.solve_for_transaction(
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/core/solve.py", line 114, in solve_for_transaction
            unlink_precs, link_precs = self.solve_for_diff(update_modifier, deps_modifier,
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/core/solve.py", line 157, in solve_for_diff
            final_precs = self.solve_final_state(update_modifier, deps_modifier, prune, ignore_pinned,
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/core/solve.py", line 262, in solve_final_state
            ssc = self._collect_all_metadata(ssc)
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/common/io.py", line 88, in decorated
            return f(*args, **kwds)
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/core/solve.py", line 415, in _collect_all_metadata
            index, r = self._prepare(prepared_specs)
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/core/solve.py", line 1010, in _prepare
            reduced_index = get_reduced_index(self.prefix, self.channels,
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/core/index.py", line 227, in get_reduced_index
            new_records = SubdirData.query_all(spec, channels=channels, subdirs=subdirs,
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/core/subdir_data.py", line 105, in query_all
            result = tuple(concat(executor.map(subdir_query, channel_urls)))
          File "/home/cqs/miniconda3/lib/python3.8/concurrent/futures/_base.py", line 611, in result_iterator
            yield fs.pop().result()
          File "/home/cqs/miniconda3/lib/python3.8/concurrent/futures/_base.py", line 432, in result
            return self.__get_result()
          File "/home/cqs/miniconda3/lib/python3.8/concurrent/futures/_base.py", line 388, in __get_result
            raise self._exception
          File "/home/cqs/miniconda3/lib/python3.8/concurrent/futures/thread.py", line 57, in run
            result = self.fn(*self.args, **self.kwargs)
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/core/subdir_data.py", line 97, in <lambda>
            subdir_query = lambda url: tuple(SubdirData(Channel(url), repodata_fn=repodata_fn).query(
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/core/subdir_data.py", line 110, in query
            self.load()
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/core/subdir_data.py", line 174, in load
            _internal_state = self._load()
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/core/subdir_data.py", line 262, in _load
            _internal_state = self._read_local_repdata(mod_etag_headers.get('_etag'),
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/core/subdir_data.py", line 311, in _read_local_repdata
            _internal_state = self._process_raw_repodata_str(raw_repodata_str)
          File "/home/cqs/miniconda3/lib/python3.8/site-packages/conda/core/subdir_data.py", line 349, in _process_raw_repodata_str
            json_obj = json.loads(raw_repodata_str or '{}')
          File "/home/cqs/miniconda3/lib/python3.8/json/__init__.py", line 357, in loads
            return _default_decoder.decode(s)
          File "/home/cqs/miniconda3/lib/python3.8/json/decoder.py", line 337, in decode
            obj, end = self.raw_decode(s, idx=_w(s, 0).end())
          File "/home/cqs/miniconda3/lib/python3.8/json/decoder.py", line 353, in raw_decode
            obj, end = self.scan_once(s, idx)
        json.decoder.JSONDecodeError: Expecting property name enclosed in double quotes: line 39011 column 49 (char 1146702)
    
    `$ /home/cqs/miniconda3/bin/conda install fastqc`
    
      environment variables:
                     CIO_TEST=<not set>
            CONDA_DEFAULT_ENV=py3.8
                    CONDA_EXE=/home/cqs/miniconda3/bin/conda
                 CONDA_PREFIX=/home/cqs/miniconda3/envs/py3.8
               CONDA_PREFIX_1=/home/cqs/miniconda3
        CONDA_PROMPT_MODIFIER=(py3.8)
             CONDA_PYTHON_EXE=/home/cqs/miniconda3/bin/python
                   CONDA_ROOT=/home/cqs/miniconda3
                  CONDA_SHLVL=2
         JAVA_LD_LIBRARY_PATH=/home/cqs/miniconda3/envs/py3.8/lib/server
                         PATH=/home/cqs/miniconda3/bin:/home/cqs/miniconda3/envs/py3.8/bin:/home/cqs
                              /miniconda3/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin
                              :/sbin:/bin:/usr/games:/usr/local/games:/mnt/c/Program Files/WindowsAp
                              ps/CanonicalGroupLimited.Ubuntu20.04onWindows_2004.2020.812.0_x64__79r
                              hkp1fndgsc:/mnt/c/Windows/system32:/mnt/c/Windows:/mnt/c/Windows/Syste
                              m32/Wbem:/mnt/c/Windows/System32/WindowsPowerShell/v1.0:/mnt/c/Windows
                              /System32/OpenSSH:/mnt/c/Program Files/Intel/WiFi/bin:/mnt/c/Program
                              Files/Common Files/Intel/WirelessCommon:/mnt/c/Users/cqs/AppData/Local
                              /Microsoft/WindowsApps:/mnt/c/Users/cqs/AppData/Local/BypassRuntm:/sna
                              p/bin
           REQUESTS_CA_BUNDLE=<not set>
                SSL_CERT_FILE=<not set>
    
         active environment : py3.8
        active env location : /home/cqs/miniconda3/envs/py3.8
                shell level : 2
           user config file : /home/cqs/.condarc
     populated config files : /home/cqs/.condarc
              conda version : 4.8.3
        conda-build version : not installed
             python version : 3.8.3.final.0
           virtual packages : __glibc=2.31
           base environment : /home/cqs/miniconda3  (writable)
               channel URLs : https://conda.anaconda.org/conda-forge/linux-64
                              https://conda.anaconda.org/conda-forge/noarch
                              https://repo.anaconda.com/pkgs/main/linux-64
                              https://repo.anaconda.com/pkgs/main/noarch
                              https://repo.anaconda.com/pkgs/r/linux-64
                              https://repo.anaconda.com/pkgs/r/noarch
                              https://conda.anaconda.org/r/linux-64
                              https://conda.anaconda.org/r/noarch
                              https://conda.anaconda.org/bioconda/linux-64
                              https://conda.anaconda.org/bioconda/noarch
                              https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free/linux-64
                              https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free/noarch
                              https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/linux-64
                              https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/noarch
                              https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/msys2/linux-64
                              https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/msys2/noarch
                              https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda/linux-64
                              https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda/noarch
              package cache : /home/cqs/miniconda3/pkgs
                              /home/cqs/.conda/pkgs
           envs directories : /home/cqs/miniconda3/envs
                              /home/cqs/.conda/envs
                   platform : linux-64
                 user-agent : conda/4.8.3 requests/2.23.0 CPython/3.8.3 Linux/4.4.0-18362-Microsoft ubuntu/20.04.1 glibc/2.31
                    UID:GID : 1000:1000
                 netrc file : None
               offline mode : False
    
    
    An unexpected error has occurred. Conda has prepared the above report.
    
    If submitted, this report will be used by core maintainers to improve
    future releases of conda.
    Would you like conda to send this report to the core maintainers?
    
    [y/N]: n
    
    No report sent. To permanently opt-out, use
    
        $ conda config --set report_errors false
    

    解决办法:

    conda clean -i

    Reference

    https://www.jianshu.com/p/2bca744fcd82

    相关文章

      网友评论

          本文标题:linux028 Conda无法安装及更新

          本文链接:https://www.haomeiwen.com/subject/qcznsktx.html