This sra toolkit installation has not been configured.
Before continuing, please run: vdb-config --interactive
For more information, see https://www.ncbi.nlm.nih.gov/sra/docs/sra-cloud/
- 先不要设置环境变量,回到安装目录,执行
./bin/vdb-config --interactive
再使用即可
I find:
I have installed SRAToolkit.2.5.2 before and written it into the PATH variable.
So, it seems thatI executevdb-config --interactivemaybesratoolkit.2.5.2The next command. That is:sratoolkit.2.5.2. Instead, I just downloadedsratoolkit.2.10.7?
Solution to this discovery:
go withIn the directory of SRAToolkit.2.10.7, execute ./bin/vdb-config --interactive。
The configuration interface is different from the last configuration interface.
After the configuration is complete, then execute ./bin/fastq-dump command, no previous Error, perform success.
Change PATH, this is later.
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