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sra安装后使用报错问题vdb-config --interac

sra安装后使用报错问题vdb-config --interac

作者: SnorkelingFan凡潜 | 来源:发表于2022-09-25 11:28 被阅读0次
    This sra toolkit installation has not been configured.
    Before continuing, please run: vdb-config --interactive
    For more information, see https://www.ncbi.nlm.nih.gov/sra/docs/sra-cloud/
    
    • 先不要设置环境变量,回到安装目录,执行./bin/vdb-config --interactive再使用即可
    I find:
    
    I have installed SRAToolkit.2.5.2 before and written it into the PATH variable.
    
    So, it seems thatI executevdb-config --interactivemaybesratoolkit.2.5.2The next command. That is:sratoolkit.2.5.2. Instead, I just downloadedsratoolkit.2.10.7?
    
     
    
    Solution to this discovery:
    
    go withIn the directory of SRAToolkit.2.10.7, execute ./bin/vdb-config --interactive。
    
    The configuration interface is different from the last configuration interface.
    
    After the configuration is complete, then execute ./bin/fastq-dump command, no previous Error, perform success.
    
     
    
    Change PATH, this is later.
    

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