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conda 安装使用

conda 安装使用

作者: 线断木偶人 | 来源:发表于2019-10-30 15:29 被阅读0次

    下载软件:

    wget -c https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh
    

    安装:

    sh Miniconda3-latest-Linux-x86_64.sh
    
    Welcome to Miniconda3 4.7.10
    
    In order to continue the installation process, please review the license
    agreement.
    Please, press ENTER to continue
    >>>回车
    
    Do you accept the license terms? [yes|no]
    [no] >>>yes
    
    Miniconda3 will now be installed into this location:
    /home/annoconda/miniconda3
    
      - Press ENTER to confirm the location
      - Press CTRL-C to abort the installation
      - Or specify a different location below
    
    [/home/annoconda/miniconda3] >>>回车或者指定安装路径
    
    Preparing transaction: done
    Executing transaction: / WARNING conda.core.envs_manager:register_env(46): Unable to register environment. Path not writable or missing.
      environment location: /home/annoconda/miniconda3
      registry file: /home/annoconda/.conda/environments.txt                                                                                              done
    installation finished.
    Do you wish the installer to initialize Miniconda3
    by running conda init? [yes|no]
    [no] >>>no
    # 这里我选择no
    # 刚开始学的人最好输入yes,目的是让conda自动给你配置环境变量
    # 输入yes的结果是:~/.bashrc这里文件里最后几行多了conda的配置信息
    ###
    ###
    # >>> conda initialize >>>
    # !! Contents within this block are managed by 'conda init' !!
    __conda_setup="$('/home/zhaosl/miniconda3/bin/conda' 'shell.bash' 'hook' 2> /dev/null)"
    if [ $? -eq 0 ]; then
        eval "$__conda_setup"
    else
        if [ -f "/home/zhaosl/miniconda3/etc/profile.d/conda.sh" ]; then
            . "/home/zhaosl/miniconda3/etc/profile.d/conda.sh"
        else
            export PATH="/home/zhaosl/miniconda3/bin:$PATH"
        fi
    fi
    unset __conda_setup
    # <<< conda initialize <<<
    ##
    ##
    
    
    You have chosen to not have conda modify your shell scripts at all.
    To activate conda's base environment in your current shell session:
    
    eval "$(/home/annoconda/miniconda3/bin/conda shell.YOUR_SHELL_NAME hook)" 
    
    To install conda's shell functions for easier access, first activate, then:
    
    conda init
    
    If you'd prefer that conda's base environment not be activated on startup, 
       set the auto_activate_base parameter to false: 
    
    conda config --set auto_activate_base false
    
    Thank you for installing Miniconda3!
    #安装好了
    

    激活 conda

    source ./miniconda3/bin/activate
    
    #添加频道
    conda config --add channels bioconda
    conda config --add channels conda-forge
    
    
    #添加镜像(清华源)
    conda config --add channels https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free/
    conda config --add channels https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/main/
    conda config --add channels https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/
    conda config --add channels https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda/
    conda config --set show_channel_urls yes 
    
    #查看
    conda config --get channels
    or
    cat ~/.condarc
    

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