2019年第28周小麦文献汇总（7.21）

2019年第28周小麦文献汇总（7.21）

1 Stage-specific functional relationships between Tub1 and Tub2 beta-tubulins in the wheat scab fungus Fusarium graminearum.

Fungal Genet Biol. 2019 Jul 15:103251. doi: 10.1016/j.fgb.2019.103251. PMID:31319136
Author:  Wang, Huan; Chen, Daipeng; Li, Chengliang; Tian, Neng; Zhang, Ju; Xu, Jin-Rong; Wang, Chenfang;

2 Genotype x environment interaction and genetic gain for grain yield and grain quality traits in Turkish spring wheat released between 1964 and 2010.

PLoS One. 2019 Jul 18;14(7):e0219432. doi: 10.1371/journal.pone.0219432. eCollection 2019. PMID:31318895
Author:  Nehe, Ajit; Akin, Beyhan; Sanal, Turgay; Evlice, Asuman Kaplan; Unsal, Riza; Dincer, Nazim; Demir, Lutfu; Geren, Hatice; Sevim, Ismail; Orhan, Sinasi; Yaktubay, Sadiye; Ezici, Ali; Guzman, Carlos; Morgounov, Alexey;

3 Development of mlo-based resistance in tetraploid wheat against wheat powdery mildew.

Theor Appl Genet. 2019 Jul 17. pii: 10.1007/s00122-019-03402-4. doi: 10.1007/s00122-019-03402-4. PMID:31317234
Author:  Ingvardsen, Christina R; Massange-Sanchez, Julio A; Borum, Finn; Uauy, Cristobal; Gregersen, Per L;

4 Mapping of agronomic traits, disease resistance and malting quality in a wide cross of two-row barley cultivars.

PLoS One. 2019 Jul 17;14(7):e0219042. doi: 10.1371/journal.pone.0219042. eCollection 2019. PMID:31314759
Author:  Goddard, Rachel; de Vos, Sarah; Steed, Andrew; Muhammed, Amal; Thomas, Keith; Griggs, David; Ridout, Christopher; Nicholson, Paul;

5 The draft genome of a wild barley genotype reveals its enrichment in genes related to biotic and abiotic stresses compared to cultivated barley.

Plant Biotechnol J. 2019 Jul 17. doi: 10.1111/pbi.13210. PMID:31314154
Author:  Liu, Miao; Li, Yan; Ma, Yanling; Zhao, Qiang; Stiller, Jiri; Feng, Qi; Tian, Qilin; Liu, Dengcai; Han, Bin; Liu, Chunji;

6 Expression of Fusarium pseudograminearum FpNPS9 in wheat plant and its function in pathogenicity.

Curr Genet. 2019 Jul 16. pii: 10.1007/s00294-019-01017-2. doi: 10.1007/s00294-019-01017-2. PMID:31312935
Author:  Kang, Ruijiao; Li, Guannan; Zhang, Mengjuan; Zhang, Panpan; Wang, Limin; Zhang, Yinshan; Chen, Linlin; Yuan, Hongxia; Ding, Shengli; Li, Honglian;

7 Uncovering homeologous relationships between tetraploid Agropyron cristatum and bread wheat genomes using COS markers.

Theor Appl Genet. 2019 Jul 16. pii: 10.1007/s00122-019-03394-1. doi: 10.1007/s00122-019-03394-1. PMID:31312850
Author:  Said, Mahmoud; Parada, Alejandro Copete; Gaal, Eszter; Molnar, Istvan; Cabrera, Adoracion; Dolezel, Jaroslav; Vrana, Jan;

8 Centromere Satellite Repeats Have Undergone Rapid Changes in Polyploid Wheat Subgenomes.

Plant Cell. 2019 Jul 16. pii: tpc.19.00133. doi: 10.1105/tpc.19.00133. PMID:31311836
Author:  Su, Handong; Liu, Yalin; Liu, Chang; Shi, Qinghua; Huang, Yuhong; Han, Fangpu;

9 Deletion mapping and verification of an enhanced-grain number per spike locus from the 6PL chromosome arm of Agropyron cristatum in common wheat.

Theor Appl Genet. 2019 Jul 15. pii: 10.1007/s00122-019-03390-5. doi: 10.1007/s00122-019-03390-5. PMID:31309244
Author:  Zhang, Zhi; Han, Haiming; Liu, Weihua; Song, Liqiang; Zhang, Jinpeng; Zhou, Shenghui; Yang, Xinming; Li, Xiuquan; Li, Lihui;

10 Cortex cell hydraulic conductivity, endodermal apoplastic barriers and root hydraulics change in barley (Hordeum vulgare L.) in response to a low supply with N and P.

Ann Bot. 2019 Jul 15. pii: 5532491. doi: 10.1093/aob/mcz113. PMID:31309230
Author:  Armand, Thomas; Cullen, Michelle; Boiziot, Florentin; Li, Lingyu; Fricke, Wieland;

11 The bread wheat epigenomic map reveals distinct chromatin architectural and evolutionary features of functional genetic elements.

Genome Biol. 2019 Jul 15;20(1):139. doi: 10.1186/s13059-019-1746-8. PMID:31307500
Author:  Li, Zijuan; Wang, Meiyue; Lin, Kande; Xie, Yilin; Guo, Jingyu; Ye, Luhuan; Zhuang, Yili; Teng, Wan; Ran, Xiaojuan; Tong, Yiping; Xue, Yongbiao; Zhang, Wenli; Zhang, Yijing;

12 TaCER1-1A is involved in cuticular wax alkane biosynthesis in hexaploid wheat and responds to plant abiotic stresses.

Plant Cell Environ. 2019 Jul 15. doi: 10.1111/pce.13614. PMID:31306498
Author:  Li, Tingting; Sun, Yulin; Liu, Tianxiang; Wu, Hongqi; An, Peipei; Shui, Zhijie; Wang, Jiahuan; Zhu, Yidan; Li, Chunlian; Wang, Yong; Jetter, Reinhard; Wang, Zhonghua;

13 From landraces to improved cultivars: Assessment of genetic diversity and population structure of Mediterranean wheat using SNP markers.

PLoS One. 2019 Jul 15;14(7):e0219867. doi: 10.1371/journal.pone.0219867. eCollection 2019. PMID:31306459
Author:  Rufo, Ruben; Alvaro, Fanny; Royo, Conxita; Soriano, Jose Miguel;

14 Mapping a Resistance Gene to Puccinia graminis f. sp. tritici in the Bread Wheat Cultivar 'Matlabas'.

Plant Dis. 2019 Jul 12:PDIS10181731RE. doi: 10.1094/PDIS-10-18-1731-RE. PMID:31306087
Author:  Wessels, Elsabet; Prins, Renee; Boshoff, Willem H P; Zurn, Jason D; Acevedo, Maricelis; Pretorius, Zacharias A;

15 Molecular signal communication during arbuscular mycorrhizal formation induces significant transcriptional reprogramming of wheat (Triticum aestivum L.) roots.

Ann Bot. 2019 Jul 13. pii: 5532238. doi: 10.1093/aob/mcz119. PMID:31304965
Author:  Tian, Hui; Wang, Runze; Li, Mengjiao; Dang, Haiyan; Solaiman, Zakaria M;

16 Identification of Fusarium graminearum-responsive miRNAs and their targets in wheat by sRNA sequencing and degradome analysis.

Funct Integr Genomics. 2019 Jul 13. pii: 10.1007/s10142-019-00699-8. doi: 10.1007/s10142-019-00699-8. PMID:31302787
Author:  Jin, Xiaojie; Jia, Linlin; Wang, Yongxia; Li, Baoquan; Sun, Dongfa; Chen, Xueyan;

17 Joint Use of Genome, Pedigree and Their Interaction with Environment for Predicting the Performance of Wheat Lines in New Environments.

G3 (Bethesda). 2019 Jul 12. pii: g3.119.400508. doi: 10.1534/g3.119.400508. PMID:31300481
Author:  Howard, Reka; Gianola, Daniel; Montesinos-Lopez, Osval; Juliana, Philomin; Singh, Ravi; Poland, Jesse; Shrestha, Sandesh; Perez-Rodriguez, Paulino; Crossa, Jose; Jarquin, Diego;

18 Frequent intra- and inter-species introgression shapes the landscape of genetic variation in bread wheat.

Genome Biol. 2019 Jul 12;20(1):136. doi: 10.1186/s13059-019-1744-x. PMID:31300020
Author:  Cheng, Hong; Liu, Jing; Wen, Jia; Nie, Xiaojun; Xu, Luohao; Chen, Ningbo; Li, Zhongxing; Wang, Qilin; Zheng, Zhuqing; Li, Ming; Cui, Licao; Liu, Zihua; Bian, Jianxin; Wang, Zhonghua; Xu, Shengbao; Yang, Qin; Appels, Rudi; Han, Dejun; Song, Weining; Sun, Qixin; Jiang, Yu;

19 C4 photosynthetic enzymes play a key role in wheat spike bracts primary carbon metabolism response under water deficit.

Plant Physiol Biochem. 2019 Jun 13;142:163-172. doi: 10.1016/j.plaphy.2019.06.013. PMID:31299598
Author:  Zhang, Xu; Pu, Peng; Tang, Yan; Zhang, Lixin; Lv, Jinyin;

20 Deletion of the benzoxazinoid detoxification gene NAT1 in Fusarium graminearum reduces deoxynivalenol in spring wheat.

PLoS One. 2019 Jul 12;14(7):e0214230. doi: 10.1371/journal.pone.0214230. eCollection 2019. PMID:31299046
Author:  Baldwin, Thomas; Baldwin, Suzette; Klos, Kathy; Bregitzer, Phil; Marshall, Juliet;

21 Virulence and Molecular Diversity in the Cochliobolus sativus Population Causing Barley Spot Blotch in China.

Plant Dis. 2019 Jul 12:PDIS11182103RE. doi: 10.1094/PDIS-11-18-2103-RE. PMID:31298990
Author:  Guo, Huanqiang; Yao, Quanjie; Chen, Lin; Wang, Fengtao; Lang, Xiaowei; Pang, Yunxing; Feng, Jing; Zhou, Jun; Lin, Ruiming; Xu, Shichang;

22 Wheat methionine sulfoxide reductase A4.1 interacts with heme oxygenase 1 to enhance seedling tolerance to salinity or drought stress.

Plant Mol Biol. 2019 Jul 12. pii: 10.1007/s11103-019-00901-2. doi: 10.1007/s11103-019-00901-2. PMID:31297725
Author:  Ding, Pengcheng; Fang, Linlin; Wang, Guangling; Li, Xiang; Huang, Shu; Gao, Yankun; Zhu, Jiantang; Xiao, Langtao; Tong, Jianhua; Chen, Fanguo; Xia, Guangmin;

周日的文献推荐有不少小伙伴给我们提过意见，其中有几条建议是附上中文的介绍。考虑到这一点，我们写了一个小脚本，利用谷歌翻译批量翻译英文摘要。考虑到每篇的推送有字数限制，遂将英文摘要和中文摘要转成了图片。不过这谷歌翻译的有点差强人意。我们也注意到有很多一线的小麦种植人员和相关的技术人员也在关注我们，所以无论中文还是英文，大家各取所需吧。我们每周的文献更新也不能保证篇篇俱到，难免有些遗漏，初心也是希望大家在空余时间方便的了解，但是不能替代大家的主动获取。所以大家在电脑上还是要每隔一段时间动手查阅下各自研究领域的进展。 麦萌，公众号：小麦研究联盟

2018年第14周小麦文献推荐（4.8）

最后再推荐一篇吧！

Ultra-fast genome comparison for large-scale genomic experiments (https://github.com/estebanpw/chromeister)

figure2

Figure 2 shows the dot plot-like representation of the comparison. The computation took less than 16 minutes and 1 GB of RAM using 1 core, whereas the same comparison on NUCMER with parameters tuned to produce similar results took 159 minutes and 53 GB of RAM, which amounts to a speedup in terms of time consumption of over 10x while using 53 times less memory.