wget http://eugene.toulouse.inra.fr/Downloads/eugene-4.2.tar.gz #下载eugene
gzip -cd eugene-4.2.tar.gz | tar xvf - #解压
cd eugene-4.2
./reconf
./configure --prefix /you/file/path
这时发现了错误，提示没有gd library这个库，那么就安装它
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
/home/zhan/biosoft/eugene/eugene-4.2/config/missing: Unknown `--is-lightweight' option
Try `/home/zhan/biosoft/eugene/eugene-4.2/config/missing --help' for more information
configure: WARNING: 'missing' script is too old or missing
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for g++... g++
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking for style of include used by make... GNU
checking dependency style of g++... gcc3
checking for gcc... gcc
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... gcc3
checking for gawk... (cached) mawk
checking whether ln -s works... yes
checking for ranlib... ranlib
checking for main in -lc... yes
checking for main in -ldl... yes
checking for main in -lgcc... yes
checking for main in -lgd... no
Error! You need to have the gd library (>= 2.0) to compile eugene.
See http://www.boutell.com/gd/http/ for a download.
安装gb library
wget -c https://github.com/libgd/libgd/releases/download/gd-2.2.5/libgd-2.2.5.tar.gz
tar -zxvf libgd-2.2.5.tar.gz
./configure --prefix=/you/file/path
make install
echo "export PATH=/you/file/path/bin:$PATH" >>~/.bashrc
source ~/.bashrc
再来config
./configure --prefix /you/file/path
还是同样的错误，然后我再网上找到了原因，是因为缺少libgb-dev
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
/home/zhan/biosoft/eugene/eugene-4.2/config/missing: Unknown `--is-lightweight' option
Try `/home/zhan/biosoft/eugene/eugene-4.2/config/missing --help' for more information
configure: WARNING: 'missing' script is too old or missing
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for g++... g++
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking for style of include used by make... GNU
checking dependency style of g++... gcc3
checking for gcc... gcc
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... gcc3
checking for gawk... (cached) mawk
checking whether ln -s works... yes
checking for ranlib... ranlib
checking for main in -lc... yes
checking for main in -ldl... yes
checking for main in -lgcc... yes
checking for main in -lgd... no
Error! You need to have the gd library (>= 2.0) to compile eugene.
See http://www.boutell.com/gd/http/ for a download.
安装libgb-dev
sudo apt-get install libgb-dev
./configure --prefix /you/file/path
make
又出现了新的错误
tclsh GenerateDoc.tcl
couldn't execute "pdflatex": no such file or directory
while executing
"exec pdflatex -interaction=nonstopmode $FIC_TEX_TMP.tex"
(file "GenerateDoc.tcl" line 102)
Makefile:402: recipe for target 'EuGeneDoc.pdf' failed
make[2]: *** [EuGeneDoc.pdf] Error 1
make[2]: Leaving directory '/home/zhan/biosoft/eugene/eugene-4.2/doc'
Makefile:461: recipe for target 'all-recursive' failed
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory '/home/zhan/biosoft/eugene/eugene-4.2'
Makefile:400: recipe for target 'all' failed
make: *** [all] Error 2
也就是说缺了latex这个文件
sudo apt-get install texlive-full latex-beamer
make clean
make
! LaTeX Error: File `multind.sty' not found.
Type X to quit or <RETURN> to proceed,
or enter new name. (Default extension: sty)
Enter file name:
! Emergency stop.
<read *>
l.11 ^^M
! ==> Fatal error occurred, no output PDF file produced!
Transcript written on EuGeneDoc.log.
child process exited abnormally
while executing
"exec pdflatex -interaction=nonstopmode $FIC_TEX_TMP.tex"
(file "GenerateDoc.tcl" line 102)
Makefile:402: recipe for target 'EuGeneDoc.pdf' failed
make[2]: *** [EuGeneDoc.pdf] Error 1
make[2]: Leaving directory '/home/zhan/biosoft/eugene/eugene-4.2/doc'
Makefile:461: recipe for target 'all-recursive' failed
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory '/home/zhan/biosoft/eugene/eugene-4.2'
Makefile:400: recipe for target 'all' failed
make: *** [all] Error 2
还报错，我的天爷啊
根据提示说少了一个multind.sty这个文件，那就去网上下载一个multind.sty
创建一个显得文件夹，将multind.sty放进去，执行以下就可以了
sudo mkdir /usr/share/texmf/tex/latex/multind
sudo mv multind.sty /usr/share/texmf/tex/latex/multind/
sudo texhash
再来安装
make
make install
成了，妈的，安装一个软件真难
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