美文网首页
终于赶走那些恼人的警告了

终于赶走那些恼人的警告了

作者: 因地制宜的生信达人 | 来源:发表于2018-12-24 21:41 被阅读37次

    终于赶走那些恼人的警告了

    程序员的3个美德,其中之一就是懒惰,凡是不影响大局的代码警告我都懒得去解决,比如每次启动R语言都会有:

    Type 'demo()' for some demos, 'help()' for on-line help, or
    'help.start()' for an HTML browser interface to help.
    Type 'q()' to quit R.
    
    During startup - Warning messages:
    1: Setting LC_CTYPE failed, using "C" 
    2: Setting LC_COLLATE failed, using "C" 
    3: Setting LC_TIME failed, using "C" 
    4: Setting LC_MESSAGES failed, using "C" 
    5: Setting LC_MONETARY failed, using "C" 
    

    这样的警告信息,因为不影响R的继续使用,所以我通常是视而不见。

    但是在安装一个R包的时候终于开始报错了,而且错误信息表明是之前的这个警告:

    > devtools::install_github("mskcc/pctGCdata")
    Downloading GitHub repo mskcc/pctGCdata@master
    tar: Failed to set default locale
    tar: Failed to set default locale
       During startup - Warning messages:
       1: Setting LC_CTYPE failed, using "C" 
       2: Setting LC_TIME failed, using "C" 
       3: Setting LC_MESSAGES failed, using "C" 
       4: Setting LC_MONETARY failed, using "C" 
    v  checking for file '/private/var/folders/2x/l4fzfvy17gz94j1sz6klhyjh0000gn/T/RtmpH50TBq/remotes4f18707324d6/mskcc-pctGCdata-c199831/DESCRIPTION' ...
    -  preparing 'pctGCdata':
    v  checking DESCRIPTION meta-information ...
    -  installing the package to process help pages
    -  saving partial Rd database (2m 1.2s)
    -  checking for LF line-endings in source and make files and shell scripts
    -  checking for empty or unneeded directories
    -  looking to see if a 'data/datalist' file should be added
    -  building 'pctGCdata_0.2.0.tar.gz'
       
    Error: (converted from warning) Setting LC_CTYPE failed, using "C"
    Execution halted
    Error in i.p(...) : 
      (converted from warning) installation of package '/var/folders/2x/l4fzfvy17gz94j1sz6klhyjh0000gn/T//RtmpH50TBq/file4f18184bb97f/pctGCdata_0.2.0.tar.gz' had non-zero exit status
    

    所以迫使我不得不去搜索解决方案,查到:

    https://stackoverflow.com/questions/9689104/installing-r-on-mac-warning-messages-setting-lc-ctype-failed-using-c 这样的MAC解决方案,所以我打开我的mac终端,去敲入代码:

    defaults write org.R-project.R force.LANG en_US.UTF-8
    

    然后重启R语言,再次进入代码编辑器,重新安装这个R包,解决问题!!!

    成功安装信息如下:

    > devtools::install_github("mskcc/pctGCdata")
    Downloading GitHub repo mskcc/pctGCdata@master
    ✔  checking for file ‘/private/var/folders/2x/l4fzfvy17gz94j1sz6klhyjh0000gn/T/RtmpUXwAea/remotes51b3692788c/mskcc-pctGCdata-c199831/DESCRIPTION’ ...
    ─  preparing ‘pctGCdata’:
    ✔  checking DESCRIPTION meta-information ...
    ─  installing the package to process help pages
    ─  saving partial Rd database (2m 3.6s)
    ─  checking for LF line-endings in source and make files and shell scripts
    ─  checking for empty or unneeded directories
    ─  looking to see if a ‘data/datalist’ file should be added
    ─  building ‘pctGCdata_0.2.0.tar.gz’
       
    * installing *source* package ‘pctGCdata’ ...
    ** R
    ** data
    *** moving datasets to lazyload DB
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded
    * DONE (pctGCdata)
    

    很有趣,为什么之前没有啥影响的警告在这个时候就成了致命的错误呢?

    相关文章

      网友评论

          本文标题:终于赶走那些恼人的警告了

          本文链接:https://www.haomeiwen.com/subject/srytlqtx.html