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kubernetes集群GPU支持方案

kubernetes集群GPU支持方案

作者: 归海听雪 | 来源:发表于2021-11-24 09:38 被阅读0次

    一.kubernetes对GPU的支持版本

    kubernetes提供对分布式节点上的AMD GPU和NVIDIA GPU管理的实验性的支持。在V1.6中已经添加了对NVIDIA GPU的支持,并且经历了多次
    向后不兼容的迭代。通过设备插件在v1.9中添加了对AMD GPU的支持。

    从1.8版本开始,使用GPU的推荐方法是使用驱动插件。要是在1.10版本之前通过设备插件启用GPU支持,必须在整个系统中将DevicePlugins功能
    设置为true: --feature-gates="DevicePlugins=true 。1.10之后版本不需要这么做了。

    然后,必须在节点上安装相应供应商GPU驱动程序,并从GPU供应商(AMD/NVIDIA)运行相应的设备插件。

    二.kubernetes集群部署GPU

    kubernetes集群版本: 1.13.5
    docker版本: 18.06.1-ce
    os系统是版本: centos7.5
    内核版本: 4.20.13-1.el7.elrepo.x86_64
    Nvidia GPU型号: P4000

    2.1 安装nvidia驱动

    2.1.1 安装gcc

    [root@k8s-01 ~]# yum install -y gcc
    
    
    image.gif

    2.1.2 下载nvidia的驱动

    下载链接: NVIDIA DRIVERS Linux x64 (AMD64/EM64T) Display Driver

    这里我们下载的是如下版本:

    [root@k8s-01 ~]# ls NVIDIA-Linux-x86_64-410.93.run -alh
    -rw-r--r-- 1 root root 103M Jul 25 17:22 NVIDIA-Linux-x86_64-410.93.run
    
    
    image.gif

    2.1.3 修改/etc/modprobe.d/blacklist.conf文件,阻止nouveau模块的加载

    [root@k8s-01 ~]# echo -e "blacklist nouveau\noptions nouveau modeset=0" > /etc/modprobe.d/blacklist.conf
    
    
    image.gif

    2.1.4 重新建立initramfs image

    [root@k8s-01 ~]# mv /boot/initramfs-$(uname -r).img /boot/initramfs-$(uname -r).img.bak
    [root@k8s-01 ~]# dracut /boot/initramfs-$(uname -r).img $(uname -r)
    
    
    image.gif

    2.1.5 执行驱动安装

    [root@k8s-01 ~]# sh NVIDIA-Linux-x86_64-410.93.run -a -q -s 
    
    
    image.gif

    2.1.6 安装工具包

    只有驱动是不够的,我们需要一些工具包便于我们使用,其中cuda、cudnn是相关工具包。

    [root@k8s-01 ~]# cat /etc/yum.repos.d/cuda.repo 
    [cuda]
    name=cuda
    baseurl=http://developer.download.nvidia.com/compute/cuda/repos/rhel7/x86_64
    enabled=1
    gpgcheck=1
    gpgkey=http://developer.download.nvidia.com/compute/cuda/repos/rhel7/x86_64/7fa2af80.pub
    [root@k8s-01 ~]#
    
    
    image.gif

    2.2 安装nvidia-docker2

    nvidia-docker是一个可以使用GPU的docker,在docker的基础上做了一层封装。目前基本被弃用。
    nvidia-docker2是一个runtime,能更好的和docker兼容。

    • 获取nvidia-docker2的yum源
    [root@k8s-01 ~]# distribution=$(. /etc/os-release;echo $ID$VERSION_ID)
    [root@k8s-01 ~]# curl -s -L https://nvidia.github.io/nvidia-docker/$distribution/nvidia-docker.repo | sudo tee /etc/yum.repos.d/nvidia-docker.repo
    
    
    image.gif
    • 查看nvidia-docker2的列表

    这里我们需要安装支持docker-18.06.1-ce版本的nvidia-docker2版本,否则会不支持。

    [root@k8s-01 ~]# yum list nvidia-docker2 --showduplicate
    Loaded plugins: fastestmirror
    Loading mirror speeds from cached hostfile
     * base: mirrors.aliyun.com
     * epel: mirror01.idc.hinet.net
     * extras: mirrors.aliyun.com
     * updates: mirrors.163.com
    Installed Packages
    nvidia-docker2.noarch                                      2.0.3-1.docker18.06.1.ce                                      @nvidia-docker
    Available Packages
    nvidia-docker2.noarch                                      2.0.0-1.docker1.12.6                                          nvidia-docker 
    nvidia-docker2.noarch                                      2.0.0-1.docker17.03.2.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.0-1.docker17.06.1.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.0-1.docker17.06.2.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.0-1.docker17.09.0.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.1-1.docker1.12.6                                          nvidia-docker 
    nvidia-docker2.noarch                                      2.0.1-1.docker1.13.1                                          nvidia-docker 
    nvidia-docker2.noarch                                      2.0.1-1.docker17.03.2.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.1-1.docker17.06.2.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.1-1.docker17.09.0.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.1-1.docker17.09.1.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.2-1.docker1.12.6                                          nvidia-docker 
    nvidia-docker2.noarch                                      2.0.2-1.docker1.13.1                                          nvidia-docker 
    nvidia-docker2.noarch                                      2.0.2-1.docker17.03.2.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.2-1.docker17.06.2.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.2-1.docker17.09.0.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.2-1.docker17.09.1.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.2-1.docker17.12.0.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-1.docker1.12.6                                          nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-1.docker1.13.1                                          nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-1.docker17.03.2.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-1.docker17.06.2.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-1.docker17.09.0.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-1.docker17.09.1.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-1.docker17.12.0.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-1.docker17.12.1.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-1.docker18.03.0.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-1.docker18.03.1.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-1.docker18.06.0.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-1.docker18.06.1.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-1.docker18.06.2                                         nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-1.docker18.09.0.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-1.docker18.09.1.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-1.docker18.09.2                                         nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-1.docker18.09.2.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-1.docker18.09.3.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-1.docker18.09.4.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-2.docker18.06.2.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-2.docker18.09.5.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-3.docker18.06.3.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-3.docker18.09.5.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-3.docker18.09.6.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.0.3-3.docker18.09.7.ce                                      nvidia-docker 
    nvidia-docker2.noarch                                      2.1.0-1                                                       nvidia-docker 
    nvidia-docker2.noarch                                      2.1.1-1                                                       nvidia-docker 
    nvidia-docker2.noarch                                      2.2.0-1                                                       nvidia-docker
    
    
    image.gif

    这里我们安装2.0.3-1.docker18.06.1.ce版本即可。

    • 安装nvidia-docker2
    [root@k8s-01 ~]# yum install -y nvidia-docker2-2.0.3-1.docker18.06.1.ce
    
    
    image.gif
    • 配置默认的docker runtime为nvidia
    [root@k8s-01 ~]# cat /etc/docker/daemon.json 
    {
        "default-runtime": "nvidia",
        "runtimes": {
            "nvidia": {
                "path": "/usr/bin/nvidia-container-runtime",
                "runtimeArgs": []
            }
        }
    }
    
    
    image.gif
    • 重启docker
    [root@k8s-01 ~]# systemctl restart docker 
    
    
    image.gif
    • 查看docker信息
    [root@k8s-01 wf-deploy]# docker info
    Containers: 63
     Running: 0
     Paused: 0
     Stopped: 63
    Images: 51
    Server Version: 18.06.1-ce
    Storage Driver: overlay2
     Backing Filesystem: xfs
     Supports d_type: true
     Native Overlay Diff: true
    Logging Driver: json-file
    Cgroup Driver: cgroupfs
    Plugins:
     Volume: local
     Network: bridge host macvlan null overlay
     Log: awslogs fluentd gcplogs gelf journald json-file logentries splunk syslog
    Swarm: inactive
    Runtimes: runc nvidia
    Default Runtime: nvidia
    Init Binary: docker-init
    containerd version: 468a545b9edcd5932818eb9de8e72413e616e86e
    runc version: 69663f0bd4b60df09991c08812a60108003fa340-dirty (expected: 69663f0bd4b60df09991c08812a60108003fa340)
    init version: fec3683
    Security Options:
     seccomp
      Profile: default
    Kernel Version: 4.20.13-1.el7.elrepo.x86_64
    Operating System: CentOS Linux 7 (Core)
    OSType: linux
    Architecture: x86_64
    CPUs: 2
    Total Memory: 7.79GiB
    Name: k8s-01
    ID: DWPY:P2I4:NWL4:3U3O:UTGC:PLJC:IGTO:7ZXJ:A7CD:SJGT:7WT5:WNGX
    Docker Root Dir: /var/lib/docker
    Debug Mode (client): false
    Debug Mode (server): false
    Registry: https://index.docker.io/v1/
    Labels:
    Experimental: false
    Insecure Registries:
     192.168.50.2
     127.0.0.0/8
    Live Restore Enabled: false
    
    
    image.gif

    可以看出docker的默认runtime为nvidia

    2.3 安装驱动插件

    • 获取插件的最新yaml文件
    [root@k8s-01 ~]# kubectl apply -f https://raw.githubusercontent.com/NVIDIA/k8s-device-plugin/v1.11/nvidia-device-plugin.yml
    
    
    image.gif

    2.4 查看有GPU的节点

    [root@wf-229 ~]# kubectl get node 192.18.1.26 -ojson | jq '.status.allocatable'
    {
      "cpu": "48",
      "ephemeral-storage": "258961942919",
      "hugepages-1Gi": "0",
      "hugepages-2Mi": "0",
      "memory": "131471388Ki",
      "nvidia.com/gpu": "1",
      "pods": "200"
    }
    
    
    image.gif

    2.5 创建包含GPU资源的POD

    [root@wf-229 gpu]# cat test.yaml 
    apiVersion: v1
    kind: Pod
    metadata:
      labels:
        k8s-app: nginx-pod
      name: nginx-pod
    spec:
      containers:
      - image: nginx:latest
        imagePullPolicy: Always
        name: nginx
        ports:
        - containerPort: 80
          name: nginx
          protocol: TCP
        resources:
          limits:
            nvidia.com/gpu: "1"
    
    
    image.gif

    2.6 查看Pod中分配的GPU资源

    [root@wf-229 gpu]# kubectl exec -it nginx-pod bash
    root@nginx-pod:/# nvidia-smi 
    Mon Aug 12 11:39:05 2019       
    +-----------------------------------------------------------------------------+
    | NVIDIA-SMI 410.93       Driver Version: 410.93       CUDA Version: N/A      |
    |-------------------------------+----------------------+----------------------+
    | GPU  Name        Persistence-M| Bus-Id        Disp.A | Volatile Uncorr. ECC |
    | Fan  Temp  Perf  Pwr:Usage/Cap|         Memory-Usage | GPU-Util  Compute M. |
    |===============================+======================+======================|
    |   0  Quadro P4000        Off  | 00000000:3B:00.0 Off |                  N/A |
    | 46%   34C    P8     5W / 105W |      0MiB /  8119MiB |      0%      Default |
    +-------------------------------+----------------------+----------------------+
    
    +-----------------------------------------------------------------------------+
    | Processes:                                                       GPU Memory |
    |  GPU       PID   Type   Process name                             Usage      |
    |=============================================================================|
    |  No running processes found                                                 |
    +-----------------------------------------------------------------------------+
    
    
    image.gif

    三.CLI介绍

    • nvidia-container-cli

    nvidia-container-cli 是一个命令行工具,用于配置Linux容器对GPU 硬件的使用。支持:
    1)list: 打印nvidia驱动库及路径
    2)info: 打印所有Nvidia GPU设备
    3)configure: 进入给定进程的命名空间,执行必要操作保证容器内可以使用被指定的GPU以及对应能力(指定 Nvidia 驱动库)。 configure是我们使用到的主要命令,它将Nvidia 驱动库的so文件 和 GPU设备信息, 通过文件挂载的方式映射到容器中。

    • 查看NODE节点GPU
    kubectl get node 192.18.1.26 -ojson | jq '.status.allocatable'
    
    image.gif

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