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动脉组织-细胞类型markers

动脉组织-细胞类型markers

作者: 信你个鬼 | 来源:发表于2020-11-09 23:21 被阅读0次
    image.png
    ## 6.s根据经典markers鉴定细胞类型
    Fibroblasts <- c("Pdgfra")
    VSMC <- c("Cnn1","Myh11")
    EC <- c("Cdh5")
    Monocytes <- c("Cd68", "Cd115", "Lyz2")
    T_B_cells <- c("Cd3d", "Cd19")
    Macrophage_DC <- c("H2-Ab1", "Cd68")
    RBC <- c("Hbb")
    
    all_markers <- c("Pdgfra","Cnn1","Myh11","Cdh5","Cd68","Cd115","Lyz2","Cd3d","Cd19","H2-Ab1","Hbb")
    VlnPlot(endo, features = all_markers,pt.size = 0)
    DotPlot(endo, features = all_markers) + coord_flip()
    

    文献:Single cell analysis of the normal mouse aorta reveals functionally distinct endothelial cell populations

    (Circulation. 2019 July 09; 140(2): 147-163.doi:10.1161/CIRCULATIONAHA.118.038362)

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