将stringtie的输出结果转换为Deseq2的input

参考实现Stingtie与DEseq2的无缝连接 - 简书 StringTie

http://ccb.jhu.edu/software/stringtie/index.shtml?t=manual
命令行：python2 prepDE.py -i 10samples-List.txt

10samples-List.txt：

生成以下文件：

其中txt文件是自己写的

---

16samples-List.txt：

17F24T ballgown-16samples/sample17F24T/17F24T.gtf

105TRA ballgown-16samples/sample105TRA/105TRA.gtf

109TRA ballgown-16samples/sample109TRA/109TRA.gtf

110A ballgown-16samples/sample110A/110A.gtf

113A ballgown-16samples/sample113A/113A.gtf

114A ballgown-16samples/sample114A/114A.gtf

120A ballgown-16samples/sample120A/120A.gtf

121A ballgown-16samples/sample121A/121A.gtf

122A ballgown-16samples/sample122A/122A.gtf

124A ballgown-16samples/sample124A/124A.gtf

126A ballgown-16samples/sample126A/126A.gtf

136A ballgown-16samples/sample136A/136A.gtf

140A ballgown-16samples/sample140A/140A.gtf

143A ballgown-16samples/sample143A/143A.gtf

153A ballgown-16samples/sample153A/153A.gtf

154A ballgown-16samples/sample154A/154A.gtf