背景:
DAP-seq: DNA
affinity purification sequencing(DNA亲和纯化测序)
AUXIN RESPONSE FACTORS (ARFs):plant-specifictranscription factors (TFs) that couple perception of the hormone auxin to geneexpression programs.
highly conserved nuclear auxinsignal transduction pathway is composed of the TIR1/AFB-Aux/IAA auxinco-receptors, the transcriptional co-repressor TOPLESS (TPL), and the AUXINRESPONSE FACTORS (ARFs).
When auxin levels are low Aux/IAAsphysically interact with particular ARFs preventing expression of their target genes;in conditions of high auxin however, auxin promotes binding between Aux/IAAsand SCFTIR1/AFB E3 ligases which results in degradation of thetranscriptionally repressive Aux/ IAAs and allows certain ARFs to activatedownstream target genes.
most ARFs: N-terminalDNA binding domain (DBD) and a C-terminal Phox and Bem1p (PB1) domain
日积月累:
Pivotal: ['pɪvətl] adj.关键的;中枢的;枢轴的 n.关键事物;中心事物
Phylogenetic: [faɪlodʒə'nɛtɪk] adj. [生物]系统发生的;动植物种类史的
fine tune 微调,调整
a handful of 一把;少量的;一小部分
stringent: [ˈstrɪndʒənt] adj. 严格的;严厉的;紧缩的;短缺的
cumulatively: [ˈkjuːmjələtɪvli] adv.累积地;渐增地
1.Due to their pivotal position in the auxin signalingpathway and expansion in all higher plant species, ARFs are strong candidatesfor triggering tissue-type and cell type-specific transcriptional changes.
emmmmm,生信还是不太懂,还需好好努力呀!!!!
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