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【文献解读】|NC:The DNA binding landsc

【文献解读】|NC:The DNA binding landsc

作者: ss的专属赫兹 | 来源:发表于2019-12-20 09:42 被阅读0次

背景:

DAP-seq: DNA

affinity purification sequencing(DNA亲和纯化测序)

AUXIN RESPONSE FACTORS (ARFs):plant-specifictranscription factors (TFs) that couple perception of the hormone auxin to geneexpression programs.

highly conserved nuclear auxinsignal transduction pathway is composed of the TIR1/AFB-Aux/IAA auxinco-receptors, the transcriptional co-repressor TOPLESS (TPL), and the AUXINRESPONSE FACTORS (ARFs).

When auxin levels are low Aux/IAAsphysically interact with particular ARFs preventing expression of their target genes;in conditions of high auxin however, auxin promotes binding between Aux/IAAsand SCFTIR1/AFB E3 ligases which results in degradation of thetranscriptionally repressive Aux/ IAAs and allows certain ARFs to activatedownstream target genes.

most ARFs: N-terminalDNA binding domain (DBD) and a C-terminal Phox and Bem1p (PB1) domain

日积月累:

Pivotal:  ['pɪvətl] adj.关键的;中枢的;枢轴的  n.关键事物;中心事物

Phylogenetic:  [faɪlodʒə'nɛtɪk]  adj. [生物]系统发生的;动植物种类史的

fine tune  微调,调整

a handful of  一把;少量的;一小部分

stringent: [ˈstrɪndʒənt] adj. 严格的;严厉的;紧缩的;短缺的

cumulatively: [ˈkjuːmjələtɪvli]   adv.累积地;渐增地

1.Due to their pivotal position in the auxin signalingpathway and expansion in all higher plant species, ARFs are strong candidatesfor triggering tissue-type and cell type-specific transcriptional changes.

emmmmm,生信还是不太懂,还需好好努力呀!!!!

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