美文网首页
pip install scanpy

pip install scanpy

作者: Seurat_Satija | 来源:发表于2021-08-26 20:50 被阅读0次
$ pip install scanpy
Requirement already satisfied: scanpy in ./.local/lib/python3.8/site-packages (1.8.1)
Requirement already satisfied: anndata>=0.7.4 in ./.local/lib/python3.8/site-packages (from scanpy) (0.7.6)
Requirement already satisfied: h5py>=2.10.0 in ./.local/lib/python3.8/site-packages (from scanpy) (3.4.0)
Requirement already satisfied: packaging in ./miniconda3/envs/sc2/lib/python3.8/site-packages (from scanpy) (21.0)
Requirement already satisfied: scikit-learn>=0.22 in ./.local/lib/python3.8/site-packages (from scanpy) (0.24.2)
Requirement already satisfied: joblib in ./.local/lib/python3.8/site-packages (from scanpy) (1.0.1)
Requirement already satisfied: matplotlib>=3.1.2 in ./.local/lib/python3.8/site-packages (from scanpy) (3.4.3)
Requirement already satisfied: numba>=0.41.0 in ./.local/lib/python3.8/site-packages (from scanpy) (0.54.0)
Requirement already satisfied: tqdm in ./.local/lib/python3.8/site-packages (from scanpy) (4.62.2)
Requirement already satisfied: networkx>=2.3 in ./.local/lib/python3.8/site-packages (from scanpy) (2.6.2)
Requirement already satisfied: seaborn in ./.local/lib/python3.8/site-packages (from scanpy) (0.11.2)
Requirement already satisfied: numpy>=1.17.0 in ./miniconda3/envs/sc2/lib/python3.8/site-packages (from scanpy) (1.18.1)
Requirement already satisfied: pandas>=0.21 in ./.local/lib/python3.8/site-packages (from scanpy) (1.3.2)
Requirement already satisfied: statsmodels>=0.10.0rc2 in ./.local/lib/python3.8/site-packages (from scanpy) (0.12.2)
Requirement already satisfied: umap-learn>=0.3.10 in ./.local/lib/python3.8/site-packages (from scanpy) (0.5.1)
Requirement already satisfied: natsort in ./.local/lib/python3.8/site-packages (from scanpy) (7.1.1)
Requirement already satisfied: sinfo in ./.local/lib/python3.8/site-packages (from scanpy) (0.3.4)
Requirement already satisfied: scipy>=1.4 in ./.local/lib/python3.8/site-packages (from scanpy) (1.7.1)
Requirement already satisfied: tables in ./.local/lib/python3.8/site-packages (from scanpy) (3.6.1)
Requirement already satisfied: patsy in ./.local/lib/python3.8/site-packages (from scanpy) (0.5.1)
Requirement already satisfied: xlrd<2.0 in ./.local/lib/python3.8/site-packages (from anndata>=0.7.4->scanpy) (1.2.0)
Requirement already satisfied: python-dateutil>=2.7 in ./miniconda3/envs/sc2/lib/python3.8/site-packages (from matplotlib>=3.1.2->scanpy) (2.8.2)
Requirement already satisfied: cycler>=0.10 in ./.local/lib/python3.8/site-packages (from matplotlib>=3.1.2->scanpy) (0.10.0)
Requirement already satisfied: pyparsing>=2.2.1 in ./miniconda3/envs/sc2/lib/python3.8/site-packages (from matplotlib>=3.1.2->scanpy) (2.4.7)
Requirement already satisfied: kiwisolver>=1.0.1 in ./.local/lib/python3.8/site-packages (from matplotlib>=3.1.2->scanpy) (1.3.1)
Requirement already satisfied: pillow>=6.2.0 in ./.local/lib/python3.8/site-packages (from matplotlib>=3.1.2->scanpy) (8.3.1)
Requirement already satisfied: six in ./miniconda3/envs/sc2/lib/python3.8/site-packages (from cycler>=0.10->matplotlib>=3.1.2->scanpy) (1.16.0)
Requirement already satisfied: llvmlite<0.38,>=0.37.0rc1 in ./.local/lib/python3.8/site-packages (from numba>=0.41.0->scanpy) (0.37.0)
Requirement already satisfied: setuptools in ./miniconda3/envs/sc2/lib/python3.8/site-packages (from numba>=0.41.0->scanpy) (57.4.0)
Requirement already satisfied: pytz>=2017.3 in ./.local/lib/python3.8/site-packages (from pandas>=0.21->scanpy) (2021.1)
Requirement already satisfied: threadpoolctl>=2.0.0 in ./.local/lib/python3.8/site-packages (from scikit-learn>=0.22->scanpy) (2.2.0)
Requirement already satisfied: pynndescent>=0.5 in ./.local/lib/python3.8/site-packages (from umap-learn>=0.3.10->scanpy) (0.5.4)
Requirement already satisfied: stdlib-list in ./.local/lib/python3.8/site-packages (from sinfo->scanpy) (0.8.0)
Requirement already satisfied: numexpr>=2.6.2 in ./.local/lib/python3.8/site-packages (from tables->scanpy) (2.7.3)
(sc2) rstudio 12:50:00 ~

成功

相关文章

网友评论

      本文标题:pip install scanpy

      本文链接:https://www.haomeiwen.com/subject/esauiltx.html