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Bismark:Failed to close filehand

Bismark:Failed to close filehand

作者: Li_bioinfo | 来源:发表于2023-03-16 11:50 被阅读0次

报错内容

Failed to close filehandle AMBIG_1: Bad file descriptor at /data/bin/bismark line 2641, <IN2> line 34189156.
Failed to close filehandle AMBIG_2: Bad file descriptor at /data/bin/bismark line 2642, <IN2> line 34189156.
Failed to close filehandle UNMAPPED_1: Bad file descriptor at /data/bin/bismark line 2643, <IN2> line 34189156.
Failed to close filehandle UNMAPPED_2: Bad file descriptor at /data/bin/bismark line 2644, <IN2> line 34189156.

原作者回答


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To a) I think this is just a warning message about closing file handles, you should just ignore the message (did you even report amibiguous or unmapped reads?)
忽略即可

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