美文网首页生信文献文章套路04|铁死亡
【铁死亡>>预后模型】06.铁死亡+colon cancer (

【铁死亡>>预后模型】06.铁死亡+colon cancer (

作者: 高大石头 | 来源:发表于2021-05-06 00:29 被阅读0次

    PMID: 33926457
    发表杂志:World Journal of Surgical Oncology

    本文因为缺少验证,因此影响因子并不高,其实作者加上内部验证或外部验证,应该会提高1-2分。

    Fig.9

    The pattern diagram of ferroptosis-related genes in colon cancer. Erastin deprives cellular cysteine, leading to GSH deletion and GPX4 inactivation. GSH is inhibited by cysteinyl-tRNA synthetase (CARS), leading to GPX4 inactivation. TPAP2C promotes the expression of GPX4 inactivation that leads to the generation of reactive oxygen species (ROS) and accumulation of lipid peroxides and final ferroptosis. NOX4, CKDN2A, and the decrease of GLUT3 and DRD4 result in accumulation of ROS, leading to ferroptosis. The mechanism of how WIPI1 regulates ferroptosis is unclear

    知识点

    • Ferroptosis-related genes, 铁死亡相关基因,作者从FerrDb数据库收集259种铁死亡相关的基因。

    摘要

    作者收集了FerrDb数据库的259种铁死亡相关基因→差异分析→unicox+Lasso→构建模型→GO+KEGG→单因素&多因素独立预后分析→临床特征分析→Nomgram

    整体思路

    结果

    1.差异分析+预后分析

    Fig.1

    2.模型构建

    Fig.2

    3.富集分析

    Fig.3

    3.模型周边

    3.1 模型与临床特征

    Fig.4
    Fig.6

    3.2 单因素&多因素独立预后分析

    Fig.5

    3.3 Nomgram


    Fig.7-8

    亮点

    • 模型构建后,PCA和t-SNE分析
    • Nomgram和DCA

    参考链接:
    Identification of a ferroptosis-related gene signature predictive model in colon cancer

    相关文章

      网友评论

        本文标题:【铁死亡>>预后模型】06.铁死亡+colon cancer (

        本文链接:https://www.haomeiwen.com/subject/ctzkdltx.html