免疫组库(Immune Repertoire,IR)是指某个个体在任何特定时间点其循环系统中所有功能多样性B淋巴细胞和T淋巴细胞的总和。T细胞和B细胞分别介导机体的细胞免疫和体液免疫应答,分别通过其表面的T细胞受体(TCR)和 B细胞受体(BCR)来识别和结合抗原,进而发挥功能清除病原体或体内肿瘤细胞。
免疫组库高通量测序是通过多重PCR或SMART RACE法扩增TCR/BCR全长或CDR3区序列(主要是TCR的β链或BCR的重链),再结合高通量测序技术,对机体免疫组库的多样性及每种 T、B细胞克隆的独特性序列组成和变化进行分析,从而全面评估机体的免疫状态,明确疾病与T、B细胞克隆组成及变化之间的关系。随着免疫组库高通量测序技术的不断发展和成熟,基于免疫组库多样性变化特点的生物标志物发现、肿瘤等疾病疗效预测、疾病的易感性和抵抗性、感染性疾病及疫苗研究等方面都取得了重要进展。
免疫组库测序技术解读丨免疫组库测序揭示肝癌组织TCR多样性及其意义
淋巴细胞发育中免疫球蛋白可变区基因片段经重组而形成完整可变区序列的过程。重链可变区基因由V、D、J各1个基因片段组成,轻链可变区基因由V、J各1个基因片段组成,VDJ基因均有多个拷贝,各片段通过随机组合(即重排)而形成多样性的抗体可变区。
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- 受体配体
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文章420以上。
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单细胞多组学:sc+
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一千万个细胞
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乳腺癌研究:NRA-seq
流程
![](https://img.haomeiwen.com/i7600498/6791e258b9dfc887.png)
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高通量,多维度
全长BCR,TCR
表面蛋白
![](https://img.haomeiwen.com/i7600498/b2ae18d685fd5c61.png)
抗体
BioLegend
![](https://img.haomeiwen.com/i7600498/0060094b4c6c8e84.png)
HLA
MHC
immudex
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文档资料:官网
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并行三个文库
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降维、聚类,tsne可视化。
案例
![](https://img.haomeiwen.com/i7600498/d706efe5530d2b29.png)
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- 200抗体同时标记细胞,相互干扰不高
- 阴性对照建议要加的
單細胞VDJ定序 Single Cell V(D)J Sequencing
Immune repertoire的簡介與應用
图片来自研讨PPT截图,仅供学习交流,侵删。
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