fastq-dump --gzip --split-files SRR10096826.1.sra
fastq-dump --gzip --split-files SRR10096827.1.sra
重命名:
_S1_L001_I1_001
_S1_L001_R1_001
_S1_L001_R2_001
read type有3种,I1为sample index read, R1为barcode和UMI, R2才是测序read.
fastq-dump --gzip --split-files SRR10096826.1.sra
fastq-dump --gzip --split-files SRR10096827.1.sra
重命名:
_S1_L001_I1_001
_S1_L001_R1_001
_S1_L001_R2_001
read type有3种,I1为sample index read, R1为barcode和UMI, R2才是测序read.
本文标题:将SRA转为fastq,fastq-dump
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